BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D01SP1|AL425844
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1356 1517 0.0
>3x_Contig1356
Length = 8043
Score = 1517 bits (760), Expect = 0.0
Identities = 773/782 (98%)
Strand = Plus / Minus
Query: 1 gatcacatcctcaactacagacttattatcagaagattgcttcgatacgggactttaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7418 gatcacatcctcaactacagacttattatcagaagattgcttcgatacgggactttaagc 7359
Query: 61 taaagagaatgtaccaaaggcaaaagtatgagctggagtgcatagataccgaaactaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7358 taaagagaatgtaccaaaggcaaaagtatgagctggagtgcatagataccgaaactaggg 7299
Query: 121 cgacaagaacgtttattcatcaagatttctacagaaaggtctcagatttgaaacataagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7298 cgacaagaacgtttattcatcaagatttctacagaaaggtctcagatttgaaacataagt 7239
Query: 181 tattaggaaacacaacccagaagtggtatgacatcaataaagagagacgtgaaatggacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7238 tattaggaaacacaacccagaagtggtatgacatcaataaagagagacgtgaaatggacg 7179
Query: 241 ttgttgtacctgaagtaaattatcacgttccaataaaaatttcaaataaatctttgagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7178 ttgttgtacctgaagtaaattatcacgttccaataaaaatttcaaataaatctttgagtt 7119
Query: 301 gtataaccggatacgcagctcctgccaatctgagacgtccaggcgacttgttatcagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7118 gtataaccggatacgcagctcctgccaatctgagacgtccaggcgacttgttatcagaag 7059
Query: 361 atttattatgtgaaaatatcaatttcagatatcataacaaccctgtcgataagttagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7058 atttattatgtgaaaatatcaatttcagatatcataacaaccctgtcgataagttagaag 6999
Query: 421 tcattgtagacagaatgaggtttaatwatgaattgagcgacttagatggtataaggvaat 480
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 6998 tcattgtagacagaatgaggtttaataatgaattgagcgacttagatggtataaggaaat 6939
Query: 481 tctatgggggattcccaggtgctcctgaacttggtggtttaayagattctgaaattcatg 540
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6938 tctatggaggattcccaggtgctcctgaacttggtggtttaaaagattctgaaattcatg 6879
Query: 541 aggatcttgcmggaatacagcatcaacmataggtcatatwatttttcactaggtgctcca 600
|||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 6878 aggatcttgcaggaatacagcatcaacaataggtcatataatttttcactaggtgctcca 6819
Query: 601 aamaccagaaaacacgctcttatcaatagtcaataahatgtcatcttgatgaatcatcat 660
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6818 aaaaccagaaaacacgctcttatcaatagtcaataaaatgtcatcttgatgaatcatcat 6759
Query: 661 ttaattatcgttttgttatgatgtgtaatctttacaagtataatatatgcatgactgtgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6758 ttaattatcgttttgttatgatgtgtaatctttacaagtataatatatgcatgactgtgt 6699
Query: 721 atatgtatagcacttttaacatttccacgatatgaaagtgtattcgaattgacatctgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6698 atatgtatagcacttttaacatttccacgatatgaaagtgtattcgaattgacatctgtg 6639
Query: 781 aa 782
||
Sbjct: 6638 aa 6637
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5623
Number of Sequences: 1807
Number of extensions: 5623
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)